The following files contain designed primers to known markers
Wheat Axiom 820k
The Axiom chip was developed by the WISP, for further information go here
The primers where designed against the pseudomolecules described in IWGSC(2018)[1].
Wheat iSelect 90k
The markers in this section are from the Illumina iSelect chip described in Wang (2014)[2].
The primers were designed against the soft-masked reference as
released in ensembl plants IWGSC1[3]. For an updated version of the
primers, please look at the primers of the Wheat Axiom 820k section
above, which contains the SNPs in the iSelect chip.
References
[1]: International Wheat Genome Sequencing Consortium (2018),
Shifting the limits in wheat research and breeding using a fully
annotated reference genome. Science, 361(eaar7191). doi: 10.1126/science.aar7191
[2]: Wang, S., Wong, D., Forrest, K., et al. (2014),
Characterization of polyploid wheat genomic diversity using a
high-density 90 000 single nucleotide polymorphism array. Plant
Biotechnology Journal, 12: 787-796. doi:10.1111/pbi.12183
[3]: International Wheat Genome Sequencing Consortium. (2014). A chromosome-based draft sequence of the hexaploid
bread wheat (Triticum aestivum) genome. Science, 345(6194), 1251788-1251788. doi:10.1126/science.1251788